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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34964159_34965484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34964159 - 34965484

Intron Length:

1326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTGGCCATATAT

Flanking Amino Acid:

MSKYWFPWLIGMPAETTMAI

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

75.8

0.64

65.8

Major PPT

83.2

0.75

0.8

77.1

37.1

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

47.5

-0.1

2.1

70.1

46.3

Associated Gene:

Gene:

ACMSD

Ensembl Gene ID:

ENSAPLG00000013859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046274

34954467 - 34981547

27081

ENSAPLT00000014445

34954467 - 34988517

34051