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Intron Name: Anas_platyrhynchos_platyrhynchos_7_35094074_35095499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35094074 - 35095499

Intron Length:

1426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

CTCTGCATAACC

Flanking Amino Acid:

IGLTIFAYGIKLLIDMVPRV

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

79.6

0.67

0.7

73.3

24.9

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

52.4

0.06

2.1

67.02

44.7

Associated Gene:

Gene:

TMEM163

Ensembl Gene ID:

ENSAPLG00000024555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030801

35000378 - 35097662

97285