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Intron Name: Anas_platyrhynchos_platyrhynchos_7_35327156_35346135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

35327156 - 35346135

Intron Length:

18980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.3

36.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

100

1.12

0.4

100

Minor 5ss

39.6

-1.2

3.3

57.8

40.6

Minor BPS

58.5

0.34

1.6

71.82

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047978

35327040 - 35689082

362043