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Intron Name: Anas_platyrhynchos_platyrhynchos_7_35346265_35442357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35346265 - 35442357

Intron Length:

96093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

GAAGAAATAACT

Flanking Amino Acid:

KRLSLDSSLVEYMDSNKYIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

74.8

0.62

39.8

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

42.8

-0.4

58.8

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047978

35327040 - 35689082

362043

ENSAPLT00000025732

35346136 - 35689082

342947

ENSAPLT00000020265

35297366 - 35689082

391717