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Intron Name: Anas_platyrhynchos_platyrhynchos_7_35502774_35552539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35502774 - 35552539

Intron Length:

49766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ACTTACATAAAT

Flanking Amino Acid:

QMRGLQEQFSRMEETVRNLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.9

36.3

Major BPS

100

1.24

0.5

100

Major PPT

81.3

0.7

0.8

74.1

36.3

Minor 5ss

46.6

-0.3

2.5

61.6

43.3

Minor BPS

53.2

0.18

1.9

74.1

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035413

35397428 - 35689082

291655

ENSAPLT00000025732

35346136 - 35689082

342947

ENSAPLT00000020265

35297366 - 35689082

391717

ENSAPLT00000047978

35327040 - 35689082

362043

ENSAPLT00000018236

35477728 - 35708030

230303

ENSAPLT00000044729

35428260 - 35689082

260823