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Intron Name: Anas_platyrhynchos_platyrhynchos_7_35552631_35568487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35552631 - 35568487

Intron Length:

15857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAGTG

5'SS Class:

major

3'SS Sequence:

AAAATCGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTAAAAAATC

Flanking Amino Acid:

GTVNIMKVYQEKLSEDSRKC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

64.4

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

64.6

0.33

1.1

Minor 5ss

40.2

-1.1

3.4

55.8

48.4

Minor BPS

44.8

-0.4

2.2

65.63

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025732

35346136 - 35689082

342947

ENSAPLT00000020265

35297366 - 35689082

391717

ENSAPLT00000047978

35327040 - 35689082

362043

ENSAPLT00000014022

35359579 - 35689082

329504

ENSAPLT00000044729

35428260 - 35689082

260823

ENSAPLT00000035413

35397428 - 35689082

291655