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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3562976_3563771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3562976 - 3563771

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

CAATGTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TACCCATTCAAT

Flanking Amino Acid:

ILAAASMPVQGPLEKSLQNS

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

79.7

0.74

79.6

35.6

Major PPT

63.9

0.31

54.3

45.3

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

-0.2

2.1

65.42

44.3

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876