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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3565443_3567057_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3565443 - 3567057

Intron Length:

1615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CATTCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTTCATT

Flanking Amino Acid:

DFRYKTIQSLEQSDKNSALI

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

100

1.24

0.5

100

Major PPT

77.3

0.61

0.8

70.3

30.3

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

62.8

0.48

1.7

81.14

35.2

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876