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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3567144_3567978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3567144 - 3567978

Intron Length:

835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTACGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

AATTCTGTGACA

Flanking Amino Acid:

MLNTLDYKRKEVLSKIGRVI

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

31.8

Major BPS

0.42

1.1

57.3

41.7

Major PPT

67.9

0.4

0.9

61.2

34.7

Minor 5ss

29.3

-2.4

2.9

35.1

41.4

Minor BPS

55.5

0.17

69.14

37.1

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876