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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3568131_3569402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3568131 - 3569402

Intron Length:

1272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCCG

5'SS Class:

major

3'SS Sequence:

TGCCTCGCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

GCAAACTGATCT

Flanking Amino Acid:

LHGGLDQLQNCFTLLAESLF

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

58.9

45.6

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

0.41

0.9

61.9

34.8

Minor 5ss

38.3

-1.3

43.1

Minor BPS

43.9

-0.3

1.9

56.81

44.6

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876