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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3571503_3572894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3571503 - 3572894

Intron Length:

1392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAC

U12 Branch Point Sequence:

TCCTCCCCACCC

Flanking Amino Acid:

YQIRVKATIDKNVSTVSNRR

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.9

29.9

Major BPS

64.5

0.36

1.2

69.3

37.7

Major PPT

83.1

0.74

0.7

81.9

28.4

Minor 5ss

35.5

-1.6

44.2

37.3

Minor BPS

45.8

-0.3

2.1

59.17

45.8

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876