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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3573932_3576394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3573932 - 3576394

Intron Length:

2463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTGGA

5'SS Class:

major

3'SS Sequence:

CTCGTTCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AGTTTTATAATT

Flanking Amino Acid:

KSSAGSKGNEGPHMVTEELH

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

66.2

39.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.5

0.64

0.8

76.2

32.4

Minor 5ss

34.5

-1.8

2.9

41.6

44.9

Minor BPS

59.7

0.38

1.5

75.48

35.2

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876