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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3579575_3580370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3579575 - 3580370

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCTTTTCACAT

Flanking Amino Acid:

YQLSWAKFCKEHLPGKSFTF

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

73.9

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

75.5

0.57

0.9

75.7

34.2

Minor 5ss

39.9

-1.1

3.6

57.8

47.2

Minor BPS

47.7

-0.1

1.9

68.37

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876