Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_35824487_35825978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35824487 - 35825978

Intron Length:

1492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGTGCT

5'SS Class:

major

3'SS Sequence:

TCTCGTCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

AATCACTGAATT

Flanking Amino Acid:

AKISFFFCFVWFLANFSYQE

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

71.7

38.2

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

78.8

0.65

0.8

69.5

36.8

Minor 5ss

34.4

-1.8

3.4

47.2

43.5

Minor BPS

55.1

0.24

1.6

71.79

38.3

Associated Gene:

Gene:

SLC35F5

Ensembl Gene ID:

ENSAPLG00000013162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013720

35812734 - 35838819

26086