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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3582864_3583382_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3582864 - 3583382

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTACTTTTAATA

Flanking Amino Acid:

VPSVFIPVSKILNDSTDPHS

Intron Amino Acid Position:

713

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.5

28.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

-1.9

2.8

41.3

38.3

Minor BPS

68.9

0.59

1.1

32.5

Associated Gene:

Gene:

STAT4

Ensembl Gene ID:

ENSAPLG00000023296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042337

3549422 - 3585297

35876