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Intron Name: Anas_platyrhynchos_platyrhynchos_7_35879660_35880203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35879660 - 35880203

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

LGPEIFFHPEFANPDFTQPI

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.8

0.71

0.8

77.2

31.6

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

ACTR3

Ensembl Gene ID:

ENSAPLG00000012845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031477

35854503 - 35882905

28403

ENSAPLT00000019658

35871149 - 35882905

11757

ENSAPLT00000013405

35855826 - 35882905

27080

ENSAPLT00000039461

35854503 - 35884925

30423