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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3592243_3592422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3592243 - 3592422

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTACACTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TATTGAGTAATT

Flanking Amino Acid:

KVKAIKNSVIDVEQDIKTLE

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

82.6

29.6

Major BPS

72.8

0.57

30.3

Major PPT

70.9

0.47

0.9

65.2

35.7

Minor 5ss

41.2

-1

2.8

Minor BPS

46.6

-0.1

2.5

74.1

42.9

Associated Gene:

Gene:

STAT1

Ensembl Gene ID:

ENSAPLG00000013226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013883

3587344 - 3608452

21109