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Intron Name: Anas_platyrhynchos_platyrhynchos_7_35978112_35979930_F

Intron Information:

Intron Rank:

147742

Intron Class:

major

Intron Phase:

Intron Coordinates:

35978112 - 35979930

Intron Length:

1819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGTTG

5'SS Class:

major

3'SS Sequence:

CATTTGCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

TTATCAGTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

41.3

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

76.8

0.6

0.9

69.2

36.7

Minor 5ss

40.6

-1.1

3.3

52.4

45.8

Minor BPS

-0.2

2.5

73.02

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029859

35963633 - 35983117

19485