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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3597995_3598851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3597995 - 3598851

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGGGAT

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAA

U12 Branch Point Sequence:

AAATGAGTGACA

Flanking Amino Acid:

GSLAAEFRHLQLKEQKNAGS

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.7

Major BPS

51.3

0.03

1.3

53.4

40.4

Major PPT

0.81

0.8

80.6

Minor 5ss

29.6

-2.3

3.8

42.2

47.2

Minor BPS

39.9

-0.8

2.4

51.36

39.8

Associated Gene:

Gene:

STAT1

Ensembl Gene ID:

ENSAPLG00000013226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013883

3587344 - 3608452

21109