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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3598894_3599387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3598894 - 3599387

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTTTTCTTATTT

Flanking Amino Acid:

QKNAGSRTNEGPLIVTEELH

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

36.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

72.2

0.5

73.6

28.9

Minor 5ss

45.8

-0.4

2.6

59.7

45.1

Minor BPS

69.9

0.7

1.5

84.13

Associated Gene:

Gene:

STAT1

Ensembl Gene ID:

ENSAPLG00000013226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013883

3587344 - 3608452

21109