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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3599472_3599640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3599472 - 3599640

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

ATAGTCTGACGT

Flanking Amino Acid:

CQPGLVIDLETTSLPIVVIS

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

63.7

0.34

1.2

41.8

Major PPT

80.8

0.69

0.8

77.2

31.5

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

43.2

-0.4

59.25

44.1

Associated Gene:

Gene:

STAT1

Ensembl Gene ID:

ENSAPLG00000013226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013883

3587344 - 3608452

21109