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Intron Name: Anas_platyrhynchos_platyrhynchos_7_36014001_36020195_F

Intron Information:

Intron Rank:

126120

Intron Class:

major

Intron Phase:

Intron Coordinates:

36014001 - 36020195

Intron Length:

6195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACCTAT

U12 Branch Point Sequence:

GGAGCAGTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

52.2

0.05

1.2

50.5

36.3

Major PPT

91.8

0.94

0.7

84.8

35.4

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

-0.4

2.3

54.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017952

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019136

36013840 - 36035519

21680

ENSAPLT00000028937

36013840 - 36032192

18353