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Intron Name: Anas_platyrhynchos_platyrhynchos_7_36014001_36051892_F

Intron Information:

Intron Rank:

126126

Intron Class:

major

Intron Phase:

Intron Coordinates:

36014001 - 36051892

Intron Length:

37892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TTTTTCCCCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

44.5

-0.5

2.2

59.67

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017952

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048322

36013840 - 36053039

39200