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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3629449_3630540_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3629449 - 3630540

Intron Length:

1092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTACTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

CTCTGCTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

75.5

0.57

0.9

68.9

36.9

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

51.5

0.13

2.1

70.75

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013327

3612969 - 3655295

42327

Gene:

Ensembl Gene ID:

ENSAPLG00000019554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036938

3626722 - 3642532

15811