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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3634884_3635145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3634884 - 3635145

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

CTGTCTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

CTGTCTTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.3

77.6

32.8

Major BPS

63.3

0.33

1.5

41.2

Major PPT

76.8

0.6

0.9

72.9

36.2

Minor 5ss

33.4

-1.9

3.2

39.2

39.9

Minor BPS

78.3

0.89

1.2

78.71

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013327

3612969 - 3655295

42327

Gene:

Ensembl Gene ID:

ENSAPLG00000019554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036938

3626722 - 3642532

15811

Gene:

Ensembl Gene ID:

ENSAPLG00000027598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031210

3634821 - 3656530

21710