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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_36398438_36398539_F

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
36398438 - 36398539
Intron Length:
102

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAGGTCAC
5'SS Class:
strong_major
3'SS Sequence:
TTTTTTTTTCAAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TATTCAA
U12 Branch Point Sequence:
AAATGTTTAATT
Flanking Amino Acid:
ASYVIYNIHTREVLELNPPE
Intron Amino Acid Position:
148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.7
0.82
1
72.3
39.5
Major BPS
83
0.82
0.8
83.9
25.3
Major PPT
86.6
0.82
0.9
86.9
31.1
Minor 5ss
33.1
-1.9
3.2
43.3
44.4
Minor BPS
59.5
0.38
1.7
72.19
39

Associated Gene:

Gene:
DPP10
Ensembl Gene ID:
ENSAPLG00000012081
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000029499
36259729 - 36460191
200463
ENSAPLT00000012677
36259471 - 36460191
200721