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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_36430362_36432512_F

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
36430362 - 36432512
Intron Length:
2151

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAAGTCAG
5'SS Class:
strong_major
3'SS Sequence:
TTTTCTCTTATAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTCAT
U12 Branch Point Sequence:
CATTTCATAAAA
Flanking Amino Acid:
CETTTGACSRKYEMQSDLWL
Intron Amino Acid Position:
342

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84
0.8
1
68.8
43.8
Major BPS
91.2
1.02
0.7
91.7
20.2
Major PPT
88.8
0.87
0.6
84.7
23.2
Minor 5ss
33.1
-1.9
2.8
33
41.8
Minor BPS
55.4
0.17
1.7
66.55
39.4

Associated Gene:

Gene:
DPP10
Ensembl Gene ID:
ENSAPLG00000012081
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000029499
36259729 - 36460191
200463
ENSAPLT00000012677
36259471 - 36460191
200721