Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_36450830_36452441_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36450830 - 36452441

Intron Length:

1612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTACGTATG

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGTT

U12 Branch Point Sequence:

TTTGTTTTGTTT

Flanking Amino Acid:

VEVKDQIAAVESLLKQPFID

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

66.6

44.8

Major BPS

38.1

-0.7

4.3

71.4

45.1

Major PPT

89.3

0.88

0.7

84.9

29.9

Minor 5ss

39.5

-1.2

47.2

42.4

Minor BPS

42.5

-0.5

3.4

73.17

Associated Gene:

Gene:

DPP10

Ensembl Gene ID:

ENSAPLG00000012081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012677

36259471 - 36460191

200721

ENSAPLT00000029499

36259729 - 36460191

200463