Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_36452497_36456445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36452497 - 36456445

Intron Length:

3949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

ATTTCCTTCATT

Flanking Amino Acid:

DPKRLSIFGKGYGGYITSMI

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

75.9

0.64

66.1

40.5

Major PPT

77.9

0.63

0.8

78.8

28.4

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

75.1

0.87

1.7

90.25

33.9

Associated Gene:

Gene:

DPP10

Ensembl Gene ID:

ENSAPLG00000012081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029499

36259729 - 36460191

200463

ENSAPLT00000012677

36259471 - 36460191

200721