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Intron Name: Anas_platyrhynchos_platyrhynchos_7_36488926_36529910_R

Intron Information:

Intron Rank:

134883

Intron Class:

major

Intron Phase:

Intron Coordinates:

36488926 - 36529910

Intron Length:

40985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTATCTGACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.5

32.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

29.5

-2.3

3.5

40.1

46.3

Minor BPS

52.3

0.07

1.7

68.41

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020230

36487278 - 36532758

45481