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Intron Name: Anas_platyrhynchos_platyrhynchos_7_36578050_36582377_F

Intron Information:

Intron Rank:

131817

Intron Class:

major

Intron Phase:

Intron Coordinates:

36578050 - 36582377

Intron Length:

4328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATTGTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TCTTTTCTATTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

0.7

0.9

81.4

35.2

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

46.5

-0.4

1.9

54.65

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029522

36577789 - 36583782

5994