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Intron Name: Anas_platyrhynchos_platyrhynchos_7_36794368_36883462_F

Intron Information:

Intron Rank:

142423

Intron Class:

major

Intron Phase:

Intron Coordinates:

36794368 - 36883462

Intron Length:

89095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCAGA

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

ACATGCTAATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

61.6

44.7

Major BPS

80.4

0.76

80.3

31.8

Major PPT

89.7

0.89

0.6

84.8

22.9

Minor 5ss

37.5

-1.4

3.1

45.3

44.7

Minor BPS

43.9

-0.4

2.2

54.03

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026983

36794228 - 36884641

90414