Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_36851082_36854688_R

Intron Information:

Intron Rank:

128867

Intron Class:

major

Intron Phase:

Intron Coordinates:

36851082 - 36854688

Intron Length:

3607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATAGAAA

5'SS Class:

major

3'SS Sequence:

TTTCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAC

U12 Branch Point Sequence:

CTGGCTTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.1

61.2

38.8

Major BPS

56.2

0.15

1.3

44.3

Major PPT

0.83

0.7

81.7

23.1

Minor 5ss

37.5

-1.4

3.2

47.7

48.1

Minor BPS

47.4

-0.1

1.9

63.77

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030291

36848619 - 36854699

6081