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Intron Name: Anas_platyrhynchos_platyrhynchos_7_36900999_36901107_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
36900999 - 36901107

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTACGGCCG

5'SS Class:
major

3'SS Sequence:
TTTGCCCTGGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTCAC

U12 Branch Point Sequence:
CCGCTCACAGCT

Flanking Amino Acid:
NLKLREAERAAPPAASLSPP

Intron Amino Acid Position:
40

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.2
0.41
1.2
49
47.1

Major BPS
57.5
0.19
1.1
60.7
37.6

Major PPT
74
0.54
1
69.9
36.5

Minor 5ss
29.6
-2.3
3.3
31
42.5

Minor BPS
39.4
-0.7
1.8
49.95
43.7

Associated Gene:

Gene:
DDX18

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36900881 - 36909897
9017

36900881 - 36910456
9576