Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_36903280_36903733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36903280 - 36903733

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTATGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CATTTTGTAACT

Flanking Amino Acid:

HKSIKPLLEGRDILAAAKTG

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

80.6

0.69

0.9

35.5

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

57.1

0.3

75.92

41.3

Associated Gene:

Gene:

DDX18

Ensembl Gene ID:

ENSAPLG00000011648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025737

36900881 - 36909897

9017

ENSAPLT00000012215

36900881 - 36910456

9576