Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_36907629_36908458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36907629 - 36908458

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATTTC

5'SS Class:

major

3'SS Sequence:

TTGTTTGTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TGTTTGTTAAAG

Flanking Amino Acid:

GFLRYLKQARVPLSEFEFSW

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

75.6

35.3

Major BPS

66.1

0.4

31.5

Major PPT

73.5

0.53

1.1

74.5

39.3

Minor 5ss

43.7

-0.7

2.9

52.8

44.6

Minor BPS

52.8

-0

2.2

64.96

42.7

Associated Gene:

Gene:

DDX18

Ensembl Gene ID:

ENSAPLG00000011648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025737

36900881 - 36909897

9017

ENSAPLT00000012215

36900881 - 36910456

9576