Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37018306_37018717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37018306 - 37018717

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

TTGAGCTAAAAA

Flanking Amino Acid:

SQFLVYNGVYQYTSPDFLYV

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

53.6

0.09

59.9

32.5

Major PPT

85.7

0.8

80.8

36.6

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

46.4

-0.2

2.2

61.1

44.7

Associated Gene:

Gene:

INSIG2

Ensembl Gene ID:

ENSAPLG00000016106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016799

37007639 - 37019800

12162

ENSAPLT00000020821

37012125 - 37020852

8728