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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3704420_3709880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3704420 - 3709880

Intron Length:

5461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTAATTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTGTGTTTAATT

Flanking Amino Acid:

KDGKHLTLHELTVNEAAAQL

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.9

35.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.67

0.9

70.3

44.5

Minor 5ss

37.3

-1.4

3.3

50.9

45.8

Minor BPS

61.1

0.43

1.8

74.76

43.2

Associated Gene:

Gene:

NAB1

Ensembl Gene ID:

ENSAPLG00000012579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013123

3692936 - 3713843

20908