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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37301223_37304438_F

Intron Information:

Intron Rank:

139839

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37301223 - 37304438

Intron Length:

3216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATATATCGGATAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTTCTATATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.2

81.5

32.7

Major BPS

71.4

0.53

67.3

39.3

Major PPT

55.1

0.11

1.1

42.9

Minor 5ss

31.7

-2.1

3.1

40.9

45.4

Minor BPS

56.1

0.27

82.22

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028736

37298309 - 37324132

25824

ENSAPLT00000021399

37298309 - 37330629

32321

ENSAPLT00000018262

37298309 - 37310790

12482

ENSAPLT00000017581

37298309 - 37305858

7550

ENSAPLT00000041380

37298309 - 37310467

12159