Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37371800_37374062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37371800 - 37374062

Intron Length:

2263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GCCCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAG

U12 Branch Point Sequence:

CCCTGCCCAGCG

Flanking Amino Acid:

CTRYSDRPSSGPRTRKLKKK

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

43.3

-0.4

1.6

52.1

45.2

Major PPT

64.6

0.33

0.9

57.1

33.4

Minor 5ss

31.2

-2.2

3.1

31.4

42.6

Minor BPS

35.1

-1.2

2.2

35.6

45.7

Associated Gene:

Gene:

EN1

Ensembl Gene ID:

ENSAPLG00000021676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034254

37370973 - 37374783

3811