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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3739146_3739767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3739146 - 3739767

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TAGTTCTCATCT

Flanking Amino Acid:

LWSEHRKYLLGYFLAVGTSS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

81.8

0.71

0.8

76.6

31.4

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

54.5

0.22

1.8

73.04

43.8

Associated Gene:

Gene:

NEMP2

Ensembl Gene ID:

ENSAPLG00000012408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012921

3733887 - 3744562

10676