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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37501974_37502390_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37501974 - 37502390

Intron Length:
417

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTGTTT

5'SS Class:
major

3'SS Sequence:
CCGTTTGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTGTAT

U12 Branch Point Sequence:
CTGTGTGTATCC

Flanking Amino Acid:
QSGARDGNKQVLICSNNQEA

Intron Amino Acid Position:
195

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.5
0.58
1
74.1
36.8

Major BPS
56.3
0.16
1.5
57.4
49.1

Major PPT
77.6
0.62
0.9
72
38

Minor 5ss
48.8
-0.1
3.1
73.2
43.6

Minor BPS
40.8
-0.7
2.4
52.87
45.5

Associated Gene:

Gene:
STEAP3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37490249 - 37510270
20022

37490766 - 37510270
19505