About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37542341_37542752_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37542341 - 37542752

Intron Length:
412

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGCAG

5'SS Class:
major

3'SS Sequence:
CCTTCCCTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTAAC

U12 Branch Point Sequence:
CTGCTCCTAACT

Flanking Amino Acid:
MTAIGAQAQRLLAQRRP

Intron Amino Acid Position:
8

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.1
60.5
45.8

Major BPS
72
0.55
1
71.8
31.4

Major PPT
71.3
0.48
1
71.3
27.1

Minor 5ss
28.7
-2.4
3.4
37.1
47.5

Minor BPS
57.3
0.31
1.7
73.62
43.1

Associated Gene:

Gene:
TMEM37

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37542320 - 37543325
1006