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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37549900_37550934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37549900 - 37550934

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ACTAGCTGAACC

Flanking Amino Acid:

AVLYCFLNGEVQLEVQRKWR

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

75.8

0.58

0.8

35.5

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

49.9

-0

1.9

62.51

42.6

Associated Gene:

Gene:

SCTR

Ensembl Gene ID:

ENSAPLG00000008608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008963

37549723 - 37568239

18517