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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37550835_37550934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37550835 - 37550934

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTTTCTCCAATG

Flanking Amino Acid:

AVLYCFLNGEFSSQLLIVTP

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

73.9

0.59

30.2

Major PPT

76.1

0.59

73.4

36.9

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

54.6

0.01

1.9

68.25

39.7

Associated Gene:

Gene:

SCTR

Ensembl Gene ID:

ENSAPLG00000008608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047226

37550439 - 37568239

17801