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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37551477_37554097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37551477 - 37554097

Intron Length:

2621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTTACTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTACTT

Flanking Amino Acid:

IKGPVVLSIFINFILFINIL

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

76.5

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.7

0.94

0.7

89.8

25.4

Minor 5ss

42.7

-0.8

3.1

65.3

39.9

Minor BPS

63.3

0.49

1.6

78.3

39.3

Associated Gene:

Gene:

SCTR

Ensembl Gene ID:

ENSAPLG00000008608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047226

37550439 - 37568239

17801

ENSAPLT00000008963

37549723 - 37568239

18517