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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37554168_37554690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37554168 - 37554690

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTTTTCTATTT

Flanking Amino Acid:

ATARQLHENTGCWDINTNAN

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

30.2

Major BPS

73.8

0.59

1.3

72.8

Major PPT

88.7

0.87

0.7

84.1

30.7

Minor 5ss

41.4

-1

2.9

49.9

46.4

Minor BPS

49.4

0.03

1.9

71.32

40.7

Associated Gene:

Gene:

SCTR

Ensembl Gene ID:

ENSAPLG00000008608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047226

37550439 - 37568239

17801

ENSAPLT00000008963

37549723 - 37568239

18517