Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_37557314_37561651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37557314 - 37561651

Intron Length:

4338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGCTA

5'SS Class:

major

3'SS Sequence:

TGTTACCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

CTGTTGTTACCA

Flanking Amino Acid:

KFFQMLTGKKGFIYRNCTSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

69.6

42.7

Major BPS

71.4

0.53

1.2

63.4

Major PPT

73.5

0.53

66.4

39.6

Minor 5ss

39.9

-1.1

3.4

56.1

Minor BPS

47.5

-0.1

2.3

61.8

Associated Gene:

Gene:

SCTR

Ensembl Gene ID:

ENSAPLG00000008608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047226

37550439 - 37568239

17801

ENSAPLT00000008963

37549723 - 37568239

18517