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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37561763_37563956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37561763 - 37563956

Intron Length:

2194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

AGAAGTTTGATG

Flanking Amino Acid:

TPENDLLLTSGRCAGMWDNM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

70.2

40.4

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

71.1

0.48

0.9

62.1

39.9

Minor 5ss

30.3

-2.3

3.7

46.8

48.5

Minor BPS

43.7

-0.6

1.7

42.34

36.7

Associated Gene:

Gene:

SCTR

Ensembl Gene ID:

ENSAPLG00000008608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008963

37549723 - 37568239

18517

ENSAPLT00000047226

37550439 - 37568239

17801