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Intron Name: Anas_platyrhynchos_platyrhynchos_7_37564084_37567946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37564084 - 37567946

Intron Length:

3863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTCAAATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGCTTTTCAAAT

Flanking Amino Acid:

VIIFWISTVLIRAAPPICDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

76.7

0.6

0.9

69.7

40.1

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

53.3

0.18

1.6

69.61

41.4

Associated Gene:

Gene:

SCTR

Ensembl Gene ID:

ENSAPLG00000008608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047226

37550439 - 37568239

17801

ENSAPLT00000008963

37549723 - 37568239

18517